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Disabled SEARCHENGINE in Doxyfile
SEARCHENGINE created lots of javascript, which didn't work with the RedmineEmbedded plugin.
Fixed existing doxygen; preparing to add more.
Added a new Doxygen generator file.
To generate a "docs" folder containing all autogenerated Doxygen files,install doxygen, then run "doxygen Doxyfile" within this folder.