SPI test code update
SPI Master->Slave works. Slave->Master not working yet. /template/main.c has the test bench. Yay!
updated timer rtc_add_function and implemented a rtc_remove_function
added get and reset functions back in to work with existing code, added get from a particular function, and reset all
Branching for encoder work in the library.
dos2unix on Makefile.
Moved port to front in template makefile.
Added two lines to the default Makefile that checks for a predefined COLONYROOT variable.I suggest everyone defines a global as the ../../.. is undependable.
Added template file.